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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIC57174.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (94 aa)    
Predicted Functional Partners:
KIC56384.1
Flagellar biosynthesis repressor FlbT; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.946
KIC56385.1
Flagellar biosynthesis regulatory protein FlaF; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.758
KIC57579.1
Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.752
KIC56672.1
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
    0.730
KIC59071.1
Regulator of CtrA degradation rcdA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.726
KIC60734.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.719
KIC56777.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.695
atpF
ATP F0F1 synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.687
KIC59799.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.683
KIC59078.1
Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.676
Your Current Organism:
Brevundimonas nasdae
NCBI taxonomy Id: 172043
Other names: B. nasdae, Brevundimonas nasdae Li et al. 2004, DSM 14572, JCM 11415, strain W1-2B
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