STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIC57174.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (94 aa)    
Predicted Functional Partners:
KIC56384.1
Flagellar biosynthesis repressor FlbT; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.926
KIC56385.1
Flagellar biosynthesis regulatory protein FlaF; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.855
KIC57579.1
Histidine phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.754
KIC59071.1
Regulator of CtrA degradation rcdA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.726
KIC60734.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.719
KIC56777.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.695
atpF
ATP F0F1 synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.687
KIC59078.1
Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.676
mnmA
Thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
 
     0.670
KIC56652.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.662
Your Current Organism:
Brevundimonas nasdae
NCBI taxonomy Id: 172043
Other names: B. nasdae, Brevundimonas nasdae Li et al. 2004, DSM 14572, JCM 11415, strain W1-2B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.