KIC56650.1 protein (Brevundimonas nasdae) - STRING interaction network

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KIC56650.1

Adenine glycosylase; Adenine glycosylase active on G-A mispairs. (349 aa)

Predicted Functional Partners:

KIC59010.1

0.842

KIC56819.1

0.842

KIC53918.1

0.842

KIC56649.1

0.650

nth

0.609

KIC60797.1

0.502

KIC57593.1

0.493

polA

0.446

KIC56862.1

0.440

KIC60565.1

0.431

Your Current Organism:

Brevundimonas nasdae

NCBI taxonomy Id: 172043
Other names: B. nasdae, Brevundimonas nasdae Li et al. 2004, DSM 14572, JCM 11415, strain W1-2B

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KIC53918.1	KIC56650.1	RM53_16190	RM53_11360	Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenine glycosylase; Adenine glycosylase active on G-A mispairs.	0.842
KIC53918.1	KIC56819.1	RM53_16190	RM53_10640	Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
KIC53918.1	KIC57593.1	RM53_16190	RM53_09835	Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.864
KIC53918.1	KIC59010.1	RM53_16190	RM53_07450	Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
KIC53918.1	KIC60565.1	RM53_16190	RM53_03730	Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.872
KIC53918.1	nth	RM53_16190	RM53_08750	Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.	Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.	0.921
KIC53918.1	polA	RM53_16190	RM53_10580	Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.896
KIC56649.1	KIC56650.1	RM53_11355	RM53_11360	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenine glycosylase; Adenine glycosylase active on G-A mispairs.	0.650
KIC56650.1	KIC53918.1	RM53_11360	RM53_16190	Adenine glycosylase; Adenine glycosylase active on G-A mispairs.	Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.842
KIC56650.1	KIC56649.1	RM53_11360	RM53_11355	Adenine glycosylase; Adenine glycosylase active on G-A mispairs.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.650
KIC56650.1	KIC56819.1	RM53_11360	RM53_10640	Adenine glycosylase; Adenine glycosylase active on G-A mispairs.	Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.842
KIC56650.1	KIC56862.1	RM53_11360	RM53_10875	Adenine glycosylase; Adenine glycosylase active on G-A mispairs.	NTP pyrophosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.440
KIC56650.1	KIC57593.1	RM53_11360	RM53_09835	Adenine glycosylase; Adenine glycosylase active on G-A mispairs.	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.493
KIC56650.1	KIC59010.1	RM53_11360	RM53_07450	Adenine glycosylase; Adenine glycosylase active on G-A mispairs.	Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.842
KIC56650.1	KIC60565.1	RM53_11360	RM53_03730	Adenine glycosylase; Adenine glycosylase active on G-A mispairs.	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.431
KIC56650.1	KIC60797.1	RM53_11360	RM53_01555	Adenine glycosylase; Adenine glycosylase active on G-A mispairs.	Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.	0.502
KIC56650.1	nth	RM53_11360	RM53_08750	Adenine glycosylase; Adenine glycosylase active on G-A mispairs.	Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.	0.609
KIC56650.1	polA	RM53_11360	RM53_10580	Adenine glycosylase; Adenine glycosylase active on G-A mispairs.	DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.446
KIC56819.1	KIC53918.1	RM53_10640	RM53_16190	Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.	Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
KIC56819.1	KIC56650.1	RM53_10640	RM53_11360	Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenine glycosylase; Adenine glycosylase active on G-A mispairs.	0.842