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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIC56651.1Amylo-alpha-1,6-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (715 aa)    
Predicted Functional Partners:
KIC56756.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.890
KIC60362.1
Phosphoglucomutase; Catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.851
KIC59545.1
Glycosyl hydrolase family 65; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.624
KIC59634.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.572
KIC59042.1
Pyruvate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pyruvate kinase family.
   
 0.544
KIC59635.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.531
KIC60824.1
Haloacid dehalogenase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
 
 0.523
KIC60826.1
Alpha,alpha-trehalose-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.478
KIC56652.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.478
KIC59047.1
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.469
Your Current Organism:
Brevundimonas nasdae
NCBI taxonomy Id: 172043
Other names: B. nasdae, Brevundimonas nasdae Li et al. 2004, DSM 14572, JCM 11415, strain W1-2B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.