Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KIC55005.1 | KIC55006.1 | RM53_15690 | RM53_15695 | Polyhydroxybutyrate depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dimethylallyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.537 |
KIC55005.1 | KIC57814.1 | RM53_15690 | RM53_09335 | Polyhydroxybutyrate depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.519 |
KIC55005.1 | KIC58834.1 | RM53_15690 | RM53_06385 | Polyhydroxybutyrate depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.420 |
KIC55005.1 | KIC59286.1 | RM53_15690 | RM53_05865 | Polyhydroxybutyrate depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | poly(R)-hydroxyalkanoic acid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.511 |
KIC55005.1 | KIC60927.1 | RM53_15690 | RM53_02275 | Polyhydroxybutyrate depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.500 |
KIC55005.1 | KIC61126.1 | RM53_15690 | RM53_00590 | Polyhydroxybutyrate depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.470 |
KIC55006.1 | KIC55005.1 | RM53_15695 | RM53_15690 | Dimethylallyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyhydroxybutyrate depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.537 |
KIC57814.1 | KIC55005.1 | RM53_09335 | RM53_15690 | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyhydroxybutyrate depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.519 |
KIC57814.1 | KIC61126.1 | RM53_09335 | RM53_00590 | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.665 |
KIC58834.1 | KIC55005.1 | RM53_06385 | RM53_15690 | Acylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyhydroxybutyrate depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.420 |
KIC59286.1 | KIC55005.1 | RM53_05865 | RM53_15690 | poly(R)-hydroxyalkanoic acid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyhydroxybutyrate depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.511 |
KIC59286.1 | KIC60927.1 | RM53_05865 | RM53_02275 | poly(R)-hydroxyalkanoic acid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.975 |
KIC60927.1 | KIC55005.1 | RM53_02275 | RM53_15690 | Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyhydroxybutyrate depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.500 |
KIC60927.1 | KIC59286.1 | RM53_02275 | RM53_05865 | Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | poly(R)-hydroxyalkanoic acid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.975 |
KIC61126.1 | KIC55005.1 | RM53_00590 | RM53_15690 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Polyhydroxybutyrate depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.470 |
KIC61126.1 | KIC57814.1 | RM53_00590 | RM53_09335 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.665 |