STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001541085_02780Unannotated protein. (285 aa)    
Predicted Functional Partners:
GCA_001541085_00786
Unannotated protein.
  
 
 0.652
GCA_001541085_01655
Unannotated protein.
  
 
  0.591
GCA_001541085_04237
Unannotated protein.
  
 
  0.591
GCA_001541085_04684
Unannotated protein.
 
 0.586
GCA_001541085_00198
Unannotated protein.
 
 0.558
GCA_001541085_04529
Unannotated protein.
  
  
 0.556
GCA_001541085_02913
Unannotated protein.
  
     0.555
GCA_001541085_02919
Unannotated protein.
  
     0.536
GCA_001541085_01318
Unannotated protein.
  
  
  0.529
GCA_001541085_02122
Unannotated protein.
  
     0.515
Your Current Organism:
Bacillus sp. FJAT28573
NCBI taxonomy Id: 1720554
Other names: B. sp. FJAT-28573, Bacillus sp. FJAT-28573
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.