STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001891165_00110Unannotated protein. (260 aa)    
Predicted Functional Partners:
GCA_001891165_00111
Unannotated protein.
 
 
 0.962
GCA_001891165_00114
Unannotated protein.
 
 
 0.951
GCA_001891165_00109
Unannotated protein.
  
  
 0.914
GCA_001891165_00112
Unannotated protein.
       0.773
GCA_001891165_00721
Unannotated protein.
 
 0.765
GCA_001891165_00113
Unannotated protein.
       0.762
GCA_001891165_00487
Unannotated protein.
 
  
 0.759
GCA_001891165_00052
Unannotated protein.
 
 
 0.732
GCA_001891165_00108
Unannotated protein.
  
  
 0.730
GCA_001891165_00840
Unannotated protein.
    
 0.722
Your Current Organism:
Streptobacillus ratti
NCBI taxonomy Id: 1720557
Other names: DSM 101843, JCM 31098, S. ratti, Streptobacillus ratti Eisenberg et al. 2016, Streptobacillus sp. OGS16, strain OGS16
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.