STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900120405_00332Unannotated protein. (242 aa)    
Predicted Functional Partners:
GCA_900120405_00331
Unannotated protein.
 
 0.999
GCA_900120405_01223
Unannotated protein.
 
  
 0.977
GCA_900120405_00287
Unannotated protein.
 
  
 0.907
GCA_900120405_00330
Unannotated protein.
    
  0.797
GCA_900120405_00329
Unannotated protein.
       0.783
GCA_900120405_00334
Unannotated protein.
       0.766
GCA_900120405_00333
Unannotated protein.
       0.757
GCA_900120405_00335
Unannotated protein.
       0.736
GCA_900120405_01187
Unannotated protein.
  
 
 0.701
GCA_900120405_01159
Unannotated protein.
  
    0.579
Your Current Organism:
Urinicoccus massiliensis
NCBI taxonomy Id: 1723382
Other names: CSUR P1992, DSM 100581, Peptoniphilaceae bacterium FC2, U. massiliensis, Urinacoccus massiliensis, strain FC2, strain Marseille-P1992
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.