STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900120405_01110Unannotated protein. (37 aa)    
Predicted Functional Partners:
GCA_900120405_01108
Unannotated protein.
  
 
 0.998
GCA_900120405_01109
Unannotated protein.
  
 
 0.998
GCA_900120405_01115
Unannotated protein.
  
 
 0.998
GCA_900120405_01116
Unannotated protein.
  
 
 0.998
GCA_900120405_01117
Unannotated protein.
  
 
 0.998
GCA_900120405_01118
Unannotated protein.
  
 
 0.998
GCA_900120405_01119
Unannotated protein.
  
 
 0.998
GCA_900120405_01120
Unannotated protein.
  
 
 0.998
GCA_900120405_01106
Unannotated protein.
  
 
 0.997
GCA_900120405_01121
Unannotated protein.
  
 
 0.996
Your Current Organism:
Urinicoccus massiliensis
NCBI taxonomy Id: 1723382
Other names: CSUR P1992, DSM 100581, Peptoniphilaceae bacterium FC2, U. massiliensis, Urinacoccus massiliensis, strain FC2, strain Marseille-P1992
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.