STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900120405_01344Unannotated protein. (285 aa)    
Predicted Functional Partners:
GCA_900120405_01321
Unannotated protein.
   
 0.872
GCA_900120405_01906
Unannotated protein.
   
 
  0.824
GCA_900120405_00529
Unannotated protein.
   
 
  0.817
GCA_900120405_01798
Unannotated protein.
 
  
 0.815
GCA_900120405_00330
Unannotated protein.
    
  0.747
GCA_900120405_01447
Unannotated protein.
    
  0.693
GCA_900120405_00497
Unannotated protein.
   
    0.569
GCA_900120405_00498
Unannotated protein.
   
    0.569
GCA_900120405_00763
Unannotated protein.
    
 0.548
GCA_900120405_00555
Unannotated protein.
     
 0.530
Your Current Organism:
Urinicoccus massiliensis
NCBI taxonomy Id: 1723382
Other names: CSUR P1992, DSM 100581, Peptoniphilaceae bacterium FC2, U. massiliensis, Urinacoccus massiliensis, strain FC2, strain Marseille-P1992
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.