STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATK06_0486Unannotated protein; Belongs to the 'phage' integrase family. (406 aa)    
Predicted Functional Partners:
ATK06_0139
Unannotated protein.
   
    0.503
ATK06_0485
Unannotated protein.
     
 0.495
ATK06_0484
Unannotated protein.
  
    0.480
apt
Unannotated protein; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.480
ATK06_0483
Unannotated protein.
       0.448
ATK06_0591
Unannotated protein.
  
    0.440
ATK06_0128
Unannotated protein; Belongs to the SOS response-associated peptidase family.
   
    0.420
whiA
Unannotated protein; Involved in cell division and chromosome segregation.
   
    0.420
polA
Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
 
  
 0.400
Your Current Organism:
Corynebacterium renale
NCBI taxonomy Id: 1724
Other names: ATCC 19412, Bacillus pyelonephritidis, Bacillus pyelonephritidis boum, Bacillus pyelonephritidis bovis, Bacillus pyelonephritis bovis, Bacillus renalis, Bacterium renale, C. renale, CCUG 27542, CIP 103421, Corynebacterium ovale, DSM 20688, HAMBI 2321, IFO 15290, JCM 9391, Mycobacterium renale, NBRC 15290, NCTC 7448
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