Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATK06_0020 | ATK06_0152 | GCA_001044175_01869 | GCA_001044175_00261 | Unannotated protein. | Unannotated protein. | 0.596 |
ATK06_0020 | ATK06_0942 | GCA_001044175_01869 | GCA_001044175_02414 | Unannotated protein. | Unannotated protein. | 0.958 |
ATK06_0020 | ATK06_1595 | GCA_001044175_01869 | GCA_001044175_01097 | Unannotated protein. | Unannotated protein. | 0.528 |
ATK06_0147 | ATK06_0152 | GCA_001044175_00255 | GCA_001044175_00261 | Unannotated protein. | Unannotated protein. | 0.758 |
ATK06_0147 | ATK06_1020 | GCA_001044175_00255 | GCA_001044175_02333 | Unannotated protein. | Unannotated protein; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.531 |
ATK06_0147 | ATK06_1221 | GCA_001044175_00255 | GCA_001044175_01760 | Unannotated protein. | Unannotated protein. | 0.880 |
ATK06_0147 | ATK06_1595 | GCA_001044175_00255 | GCA_001044175_01097 | Unannotated protein. | Unannotated protein. | 0.491 |
ATK06_0147 | GCA_001044175_01845 | GCA_001044175_00255 | GCA_001044175_01845 | Unannotated protein. | Unannotated protein. | 0.856 |
ATK06_0147 | rbsK | GCA_001044175_00255 | GCA_001044175_01355 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.889 |
ATK06_0152 | ATK06_0020 | GCA_001044175_00261 | GCA_001044175_01869 | Unannotated protein. | Unannotated protein. | 0.596 |
ATK06_0152 | ATK06_0147 | GCA_001044175_00261 | GCA_001044175_00255 | Unannotated protein. | Unannotated protein. | 0.758 |
ATK06_0152 | ATK06_0942 | GCA_001044175_00261 | GCA_001044175_02414 | Unannotated protein. | Unannotated protein. | 0.910 |
ATK06_0152 | ATK06_1595 | GCA_001044175_00261 | GCA_001044175_01097 | Unannotated protein. | Unannotated protein. | 0.502 |
ATK06_0152 | GCA_001044175_01845 | GCA_001044175_00261 | GCA_001044175_01845 | Unannotated protein. | Unannotated protein. | 0.542 |
ATK06_0942 | ATK06_0020 | GCA_001044175_02414 | GCA_001044175_01869 | Unannotated protein. | Unannotated protein. | 0.958 |
ATK06_0942 | ATK06_0152 | GCA_001044175_02414 | GCA_001044175_00261 | Unannotated protein. | Unannotated protein. | 0.910 |
ATK06_0942 | ATK06_1221 | GCA_001044175_02414 | GCA_001044175_01760 | Unannotated protein. | Unannotated protein. | 0.877 |
ATK06_0942 | ATK06_1595 | GCA_001044175_02414 | GCA_001044175_01097 | Unannotated protein. | Unannotated protein. | 0.622 |
ATK06_0942 | rbsK | GCA_001044175_02414 | GCA_001044175_01355 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.863 |
ATK06_1020 | ATK06_0147 | GCA_001044175_02333 | GCA_001044175_00255 | Unannotated protein; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | Unannotated protein. | 0.531 |
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