Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATK06_0042 | ATK06_1494 | GCA_001044175_01847 | GCA_001044175_01216 | Unannotated protein. | Unannotated protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. | 0.774 |
ATK06_0042 | ATK06_1495 | GCA_001044175_01847 | GCA_001044175_01215 | Unannotated protein. | Unannotated protein; Belongs to the class-II DAHP synthase family. | 0.999 |
ATK06_0042 | ATK06_1751 | GCA_001044175_01847 | GCA_001044175_00381 | Unannotated protein. | Unannotated protein. | 0.602 |
ATK06_0042 | ATK06_1796 | GCA_001044175_01847 | GCA_001044175_00430 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.461 |
ATK06_0042 | GCA_001044175_00429 | GCA_001044175_01847 | GCA_001044175_00429 | Unannotated protein. | Unannotated protein. | 0.461 |
ATK06_0042 | GCA_001044175_01217 | GCA_001044175_01847 | GCA_001044175_01217 | Unannotated protein. | Unannotated protein. | 0.773 |
ATK06_0042 | aroB | GCA_001044175_01847 | GCA_001044175_00386 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.495 |
ATK06_0042 | aroC | GCA_001044175_01847 | GCA_001044175_00383 | Unannotated protein. | Unannotated protein; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.971 |
ATK06_0042 | aroK | GCA_001044175_01847 | GCA_001044175_00384 | Unannotated protein. | Unannotated protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.689 |
ATK06_1493 | ATK06_1494 | GCA_001044175_01218 | GCA_001044175_01216 | Unannotated protein. | Unannotated protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. | 0.526 |
ATK06_1493 | ATK06_1495 | GCA_001044175_01218 | GCA_001044175_01215 | Unannotated protein. | Unannotated protein; Belongs to the class-II DAHP synthase family. | 0.470 |
ATK06_1493 | GCA_001044175_01217 | GCA_001044175_01218 | GCA_001044175_01217 | Unannotated protein. | Unannotated protein. | 0.526 |
ATK06_1494 | ATK06_0042 | GCA_001044175_01216 | GCA_001044175_01847 | Unannotated protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. | Unannotated protein. | 0.774 |
ATK06_1494 | ATK06_1493 | GCA_001044175_01216 | GCA_001044175_01218 | Unannotated protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. | Unannotated protein. | 0.526 |
ATK06_1494 | ATK06_1495 | GCA_001044175_01216 | GCA_001044175_01215 | Unannotated protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. | Unannotated protein; Belongs to the class-II DAHP synthase family. | 0.567 |
ATK06_1494 | GCA_001044175_01217 | GCA_001044175_01216 | GCA_001044175_01217 | Unannotated protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. | Unannotated protein. | 0.984 |
ATK06_1495 | ATK06_0042 | GCA_001044175_01215 | GCA_001044175_01847 | Unannotated protein; Belongs to the class-II DAHP synthase family. | Unannotated protein. | 0.999 |
ATK06_1495 | ATK06_1493 | GCA_001044175_01215 | GCA_001044175_01218 | Unannotated protein; Belongs to the class-II DAHP synthase family. | Unannotated protein. | 0.470 |
ATK06_1495 | ATK06_1494 | GCA_001044175_01215 | GCA_001044175_01216 | Unannotated protein; Belongs to the class-II DAHP synthase family. | Unannotated protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. | 0.567 |
ATK06_1495 | ATK06_1751 | GCA_001044175_01215 | GCA_001044175_00381 | Unannotated protein; Belongs to the class-II DAHP synthase family. | Unannotated protein. | 0.706 |
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