STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATK06_0363Unannotated protein. (570 aa)    
Predicted Functional Partners:
ATK06_0578
Unannotated protein.
  
     0.620
ATK06_2177
Unannotated protein.
  
     0.572
ATK06_0736
Unannotated protein.
  
     0.562
ATK06_1134
Unannotated protein.
  
  
 
0.557
GCA_001044175_01655
Unannotated protein.
       0.543
ATK06_0350
Unannotated protein.
  
     0.537
ATK06_0364
Unannotated protein.
       0.533
ATK06_0768
Unannotated protein.
  
     0.531
ATK06_1145
Unannotated protein.
  
     0.518
GCA_001044175_02184
Unannotated protein.
  
     0.452
Your Current Organism:
Corynebacterium renale
NCBI taxonomy Id: 1724
Other names: ATCC 19412, Bacillus pyelonephritidis, Bacillus pyelonephritidis boum, Bacillus pyelonephritidis bovis, Bacillus pyelonephritis bovis, Bacillus renalis, Bacterium renale, C. renale, CCUG 27542, CIP 103421, Corynebacterium ovale, DSM 20688, HAMBI 2321, IFO 15290, JCM 9391, Mycobacterium renale, NBRC 15290, NCTC 7448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.