Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATK06_0102 | ATK06_0141 | GCA_001044175_00201 | GCA_001044175_00248 | Unannotated protein. | Unannotated protein. | 0.941 |
ATK06_0102 | ATK06_0218 | GCA_001044175_00201 | GCA_001044175_00338 | Unannotated protein. | Unannotated protein. | 0.438 |
ATK06_0102 | ATK06_1239 | GCA_001044175_00201 | GCA_001044175_01739 | Unannotated protein. | Unannotated protein. | 0.493 |
ATK06_0102 | GCA_001044175_00249 | GCA_001044175_00201 | GCA_001044175_00249 | Unannotated protein. | Unannotated protein. | 0.941 |
ATK06_0141 | ATK06_0102 | GCA_001044175_00248 | GCA_001044175_00201 | Unannotated protein. | Unannotated protein. | 0.941 |
ATK06_0141 | ATK06_0218 | GCA_001044175_00248 | GCA_001044175_00338 | Unannotated protein. | Unannotated protein. | 0.694 |
ATK06_0141 | ATK06_1239 | GCA_001044175_00248 | GCA_001044175_01739 | Unannotated protein. | Unannotated protein. | 0.558 |
ATK06_0141 | ATK06_1735 | GCA_001044175_00248 | GCA_001044175_00947 | Unannotated protein. | Unannotated protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.446 |
ATK06_0141 | GCA_001044175_00249 | GCA_001044175_00248 | GCA_001044175_00249 | Unannotated protein. | Unannotated protein. | 0.974 |
ATK06_0141 | ribBA | GCA_001044175_00248 | GCA_001044175_00413 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.863 |
ATK06_0218 | ATK06_0102 | GCA_001044175_00338 | GCA_001044175_00201 | Unannotated protein. | Unannotated protein. | 0.438 |
ATK06_0218 | ATK06_0141 | GCA_001044175_00338 | GCA_001044175_00248 | Unannotated protein. | Unannotated protein. | 0.694 |
ATK06_0218 | ATK06_1239 | GCA_001044175_00338 | GCA_001044175_01739 | Unannotated protein. | Unannotated protein. | 0.574 |
ATK06_0218 | ATK06_1902 | GCA_001044175_00338 | GCA_001044175_00549 | Unannotated protein. | Unannotated protein. | 0.469 |
ATK06_0218 | GCA_001044175_00249 | GCA_001044175_00338 | GCA_001044175_00249 | Unannotated protein. | Unannotated protein. | 0.694 |
ATK06_0218 | ribBA | GCA_001044175_00338 | GCA_001044175_00413 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.893 |
ATK06_1237 | ATK06_1238 | GCA_001044175_01741 | GCA_001044175_01740 | Unannotated protein. | Unannotated protein. | 0.999 |
ATK06_1237 | ATK06_1239 | GCA_001044175_01741 | GCA_001044175_01739 | Unannotated protein. | Unannotated protein. | 0.638 |
ATK06_1238 | ATK06_1237 | GCA_001044175_01740 | GCA_001044175_01741 | Unannotated protein. | Unannotated protein. | 0.999 |
ATK06_1238 | ATK06_1239 | GCA_001044175_01740 | GCA_001044175_01739 | Unannotated protein. | Unannotated protein. | 0.852 |
page 1 of 3