STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001044175_01779Unannotated protein. (67 aa)    
Predicted Functional Partners:
clpS
Unannotated protein; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
  
  
 0.805
ATK06_1876
Unannotated protein.
   
    0.774
ATK06_1202
Unannotated protein.
       0.773
ATK06_1203
Unannotated protein.
  
  
 0.611
ATK06_1204
Unannotated protein.
     
 0.607
ATK06_1199
Unannotated protein.
       0.588
ATK06_1200
Unannotated protein; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
       0.572
GCA_001044175_01783
Unannotated protein.
       0.572
ATK06_0394
Unannotated protein.
   
    0.420
Your Current Organism:
Corynebacterium renale
NCBI taxonomy Id: 1724
Other names: ATCC 19412, Bacillus pyelonephritidis, Bacillus pyelonephritidis boum, Bacillus pyelonephritidis bovis, Bacillus pyelonephritis bovis, Bacillus renalis, Bacterium renale, C. renale, CCUG 27542, CIP 103421, Corynebacterium ovale, DSM 20688, HAMBI 2321, IFO 15290, JCM 9391, Mycobacterium renale, NBRC 15290, NCTC 7448
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