STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATK06_1002Unannotated protein. (179 aa)    
Predicted Functional Partners:
ATK06_1004
Unannotated protein.
 
  
 0.945
ATK06_1007
Unannotated protein.
 
   
 0.876
ATK06_1006
Unannotated protein.
 
   
 0.874
ATK06_1008
Unannotated protein.
 
   
 0.855
ATK06_1005
Unannotated protein.
 
  
 0.826
ATK06_1003
Unannotated protein; Belongs to the FPP/GGPP synthase family.
     
 0.805
GCA_001044175_02353
Unannotated protein.
     
 0.805
ATK06_1983
Unannotated protein; Belongs to the cytochrome P450 family.
    
  0.587
idi
Unannotated protein; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
  
   
 0.515
ATK06_0615
Unannotated protein.
  
     0.483
Your Current Organism:
Corynebacterium renale
NCBI taxonomy Id: 1724
Other names: ATCC 19412, Bacillus pyelonephritidis, Bacillus pyelonephritidis boum, Bacillus pyelonephritidis bovis, Bacillus pyelonephritis bovis, Bacillus renalis, Bacterium renale, C. renale, CCUG 27542, CIP 103421, Corynebacterium ovale, DSM 20688, HAMBI 2321, IFO 15290, JCM 9391, Mycobacterium renale, NBRC 15290, NCTC 7448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.