STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATK06_0935Unannotated protein. (364 aa)    
Predicted Functional Partners:
ATK06_0936
Unannotated protein.
     
 0.869
ATK06_0937
Unannotated protein.
    
  0.829
ATK06_0934
Unannotated protein.
       0.704
ATK06_0933
Unannotated protein.
     
 0.699
ATK06_0938
Unannotated protein.
       0.612
GCA_001044175_02425
Unannotated protein.
       0.584
ATK06_1082
Unannotated protein.
  
  
 0.559
ATK06_0235
Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
 
 
  0.537
ATK06_1433
Unannotated protein.
 
 
 0.501
ATK06_1067
Unannotated protein.
  
  
 0.500
Your Current Organism:
Corynebacterium renale
NCBI taxonomy Id: 1724
Other names: ATCC 19412, Bacillus pyelonephritidis, Bacillus pyelonephritidis boum, Bacillus pyelonephritidis bovis, Bacillus pyelonephritis bovis, Bacillus renalis, Bacterium renale, C. renale, CCUG 27542, CIP 103421, Corynebacterium ovale, DSM 20688, HAMBI 2321, IFO 15290, JCM 9391, Mycobacterium renale, NBRC 15290, NCTC 7448
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.