STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV33465.1AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (846 aa)    
Predicted Functional Partners:
ALV31164.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
ALV36571.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
ALV38048.1
Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.767
ALV34615.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.766
ALV30766.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.760
ALV33466.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.
 
     0.755
ALV31467.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.744
ALV38816.1
Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.739
ALV31863.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.738
ALV32734.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.733
Your Current Organism:
Streptomyces sp. CdTB01
NCBI taxonomy Id: 1725411
Other names: S. sp. CdTB01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.