STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV33725.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (348 aa)    
Predicted Functional Partners:
ALV33724.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.880
ALV33726.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.742
ALV33717.1
Reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.669
ALV33727.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.638
ALV33719.1
Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.621
ALV33718.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.614
ALV33715.1
Molybdopterin biosynthesis-like protein MoeZ; The proteins in this cluster have high sequence similarity to MoeB and are possibly involved in the synthesis of molybdopterin, but there has been no biochemical or physiological characterization. There is also no genetic linkage to other molybdopterin cofactor synthesis proteins. These proteins are similar to a Pseudomonas stutzeri protein which is essential to pyridine-2,6-bis(thiocarboxylic acid) synthesis that possibly activates a substrate by adenylation; Derived by automated computational analysis using gene prediction method: Protein [...]
  
  
 0.598
ALV33728.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.589
ALV38622.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.565
ALV31286.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.523
Your Current Organism:
Streptomyces sp. CdTB01
NCBI taxonomy Id: 1725411
Other names: S. sp. CdTB01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.