STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV38253.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (426 aa)    
Predicted Functional Partners:
ALV38252.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.809
AS200_44200
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.767
ALV31795.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.602
ALV33646.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.548
ALV31848.1
Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.455
ALV32256.1
Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.453
ALV36084.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.450
ALV38085.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.424
ALV38310.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.412
ALV37779.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.412
Your Current Organism:
Streptomyces sp. CdTB01
NCBI taxonomy Id: 1725411
Other names: S. sp. CdTB01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.