STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
serCUnannotated protein; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. (363 aa)    
Predicted Functional Partners:
B4V02_10340
Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 0.987
B4V02_07320
Unannotated protein.
   
 0.945
B4V02_24915
Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.917
B4V02_20570
Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.917
B4V02_19345
Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.805
B4V02_17540
Unannotated protein.
  
  
 0.776
B4V02_17530
Unannotated protein; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
       0.758
aroA
Unannotated protein; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
  
  
 0.701
pheA
Unannotated protein.
  
  
 0.685
B4V02_17525
Unannotated protein.
       0.674
Your Current Organism:
Paenibacillus kribbensis
NCBI taxonomy Id: 172713
Other names: JCM 11465, KCTC 0766BP, P. kribbensis, Paenibacillus kribbensis Yoon et al. 2003, strain AM49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.