STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4V02_17830Unannotated protein. (345 aa)    
Predicted Functional Partners:
B4V02_17825
Unannotated protein.
 
 
 0.995
B4V02_17815
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.993
B4V02_17820
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.992
B4V02_07910
Unannotated protein.
  
  
 
0.917
B4V02_14260
Unannotated protein.
 
     0.515
B4V02_10450
Unannotated protein.
 
     0.473
guaA
Unannotated protein; Catalyzes the synthesis of GMP from XMP.
     
 0.448
B4V02_19625
Unannotated protein.
 
     0.413
B4V02_08765
Unannotated protein.
   
    0.410
B4V02_17810
Unannotated protein.
       0.405
Your Current Organism:
Paenibacillus kribbensis
NCBI taxonomy Id: 172713
Other names: JCM 11465, KCTC 0766BP, P. kribbensis, Paenibacillus kribbensis Yoon et al. 2003, strain AM49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.