STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001705305_00459Unannotated protein. (122 aa)    
Predicted Functional Partners:
GCA_001705305_04640
Unannotated protein.
 
     0.779
B4V02_05260
Unannotated protein.
 
     0.770
B4V02_04545
Unannotated protein.
 
     0.770
B4V02_03465
Unannotated protein.
 
    0.757
B4V02_12200
Unannotated protein.
 
     0.745
GCA_001705305_01022
Unannotated protein.
  
     0.703
B4V02_13125
Unannotated protein.
  
     0.702
B4V02_03470
Unannotated protein.
 
    0.663
GCA_001705305_00999
Unannotated protein.
  
     0.514
GCA_001705305_01016
Unannotated protein.
  
     0.506
Your Current Organism:
Paenibacillus kribbensis
NCBI taxonomy Id: 172713
Other names: JCM 11465, KCTC 0766BP, P. kribbensis, Paenibacillus kribbensis Yoon et al. 2003, strain AM49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.