STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsCUnannotated protein; Belongs to the binding-protein-dependent transport system permease family. (322 aa)    
Predicted Functional Partners:
B4V02_11740
Unannotated protein.
 0.997
rbsA
Unannotated protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.996
rbsD
Unannotated protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.980
B4V02_19910
Unannotated protein.
 
 0.979
B4V02_19665
Unannotated protein.
 0.978
rbsK
Unannotated protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.950
B4V02_10450
Unannotated protein.
 
 0.923
B4V02_14260
Unannotated protein.
 
 0.922
B4V02_19625
Unannotated protein.
 
 0.905
B4V02_14265
Unannotated protein.
 
 0.902
Your Current Organism:
Paenibacillus kribbensis
NCBI taxonomy Id: 172713
Other names: JCM 11465, KCTC 0766BP, P. kribbensis, Paenibacillus kribbensis Yoon et al. 2003, strain AM49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.