Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B4V02_22470 | B4V02_25060 | GCA_001705305_00357 | GCA_001705305_01477 | Unannotated protein. | Unannotated protein. | 0.685 |
B4V02_22470 | B4V02_25070 | GCA_001705305_00357 | GCA_001705305_01475 | Unannotated protein. | Unannotated protein. | 0.568 |
B4V02_22470 | glmU | GCA_001705305_00357 | GCA_001705305_01479 | Unannotated protein. | Unannotated protein; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.568 |
B4V02_22470 | ispE | GCA_001705305_00357 | GCA_001705305_01476 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.568 |
B4V02_22470 | spoVG | GCA_001705305_00357 | GCA_001705305_01478 | Unannotated protein. | Unannotated protein; Could be involved in septation. | 0.640 |
B4V02_25060 | B4V02_22470 | GCA_001705305_01477 | GCA_001705305_00357 | Unannotated protein. | Unannotated protein. | 0.685 |
B4V02_25060 | B4V02_25070 | GCA_001705305_01477 | GCA_001705305_01475 | Unannotated protein. | Unannotated protein. | 0.686 |
B4V02_25060 | B4V02_25075 | GCA_001705305_01477 | GCA_001705305_01474 | Unannotated protein. | Unannotated protein. | 0.855 |
B4V02_25060 | glmU | GCA_001705305_01477 | GCA_001705305_01479 | Unannotated protein. | Unannotated protein; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.857 |
B4V02_25060 | ispE | GCA_001705305_01477 | GCA_001705305_01476 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.770 |
B4V02_25060 | prs | GCA_001705305_01477 | GCA_001705305_01480 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.560 |
B4V02_25060 | spoVG | GCA_001705305_01477 | GCA_001705305_01478 | Unannotated protein. | Unannotated protein; Could be involved in septation. | 0.799 |
B4V02_25070 | B4V02_22470 | GCA_001705305_01475 | GCA_001705305_00357 | Unannotated protein. | Unannotated protein. | 0.568 |
B4V02_25070 | B4V02_25060 | GCA_001705305_01475 | GCA_001705305_01477 | Unannotated protein. | Unannotated protein. | 0.686 |
B4V02_25070 | B4V02_25075 | GCA_001705305_01475 | GCA_001705305_01474 | Unannotated protein. | Unannotated protein. | 0.799 |
B4V02_25070 | glmU | GCA_001705305_01475 | GCA_001705305_01479 | Unannotated protein. | Unannotated protein; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.626 |
B4V02_25070 | ispE | GCA_001705305_01475 | GCA_001705305_01476 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.754 |
B4V02_25070 | spoVG | GCA_001705305_01475 | GCA_001705305_01478 | Unannotated protein. | Unannotated protein; Could be involved in septation. | 0.650 |
B4V02_25075 | B4V02_25060 | GCA_001705305_01474 | GCA_001705305_01477 | Unannotated protein. | Unannotated protein. | 0.855 |
B4V02_25075 | B4V02_25070 | GCA_001705305_01474 | GCA_001705305_01475 | Unannotated protein. | Unannotated protein. | 0.799 |
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