STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4V02_13885Unannotated protein; Belongs to the glycosyl hydrolase 1 family. (476 aa)    
Predicted Functional Partners:
B4V02_24680
Unannotated protein.
  
 
  0.905
B4V02_13315
Unannotated protein.
    
 0.904
pgi
Unannotated protein; Belongs to the GPI family.
     
 0.903
B4V02_02080
Unannotated protein.
     
  0.900
B4V02_13890
Unannotated protein.
  
  
 0.771
B4V02_22025
Unannotated protein; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
 
 0.753
B4V02_22035
Unannotated protein.
  
 
 0.753
B4V02_00510
Unannotated protein; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
 
 0.753
B4V02_00500
Unannotated protein.
  
 
 0.753
B4V02_03445
Unannotated protein.
  
 
 0.753
Your Current Organism:
Paenibacillus kribbensis
NCBI taxonomy Id: 172713
Other names: JCM 11465, KCTC 0766BP, P. kribbensis, Paenibacillus kribbensis Yoon et al. 2003, strain AM49
Server load: low (18%) [HD]