STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4V02_14030Unannotated protein. (410 aa)    
Predicted Functional Partners:
B4V02_14045
Unannotated protein.
 
  
 0.909
B4V02_14025
Unannotated protein.
 
  
 0.836
B4V02_14040
Unannotated protein.
 
  
 0.832
B4V02_14035
Unannotated protein; Belongs to the HpcH/HpaI aldolase family.
 
     0.756
B4V02_14055
Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
   
 0.715
B4V02_14050
Unannotated protein; Belongs to the major facilitator superfamily.
       0.669
hisI
Unannotated protein; In the N-terminal section; belongs to the PRA-CH family.
  
  
 0.550
guaB
Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
 0.531
B4V02_14020
Unannotated protein.
       0.514
dapA-2
Unannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
 
  
 0.487
Your Current Organism:
Paenibacillus kribbensis
NCBI taxonomy Id: 172713
Other names: JCM 11465, KCTC 0766BP, P. kribbensis, Paenibacillus kribbensis Yoon et al. 2003, strain AM49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.