Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B4V02_02640 | B4V02_02665 | GCA_001705305_02591 | GCA_001705305_02586 | Unannotated protein; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | Unannotated protein. | 0.813 |
B4V02_02640 | B4V02_13270 | GCA_001705305_02591 | GCA_001705305_04821 | Unannotated protein; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | Unannotated protein. | 0.746 |
B4V02_02640 | B4V02_15845 | GCA_001705305_02591 | GCA_001705305_01929 | Unannotated protein; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | Unannotated protein. | 0.439 |
B4V02_02640 | B4V02_19165 | GCA_001705305_02591 | GCA_001705305_03589 | Unannotated protein; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | Unannotated protein. | 0.796 |
B4V02_02640 | B4V02_19245 | GCA_001705305_02591 | GCA_001705305_03573 | Unannotated protein; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | Unannotated protein. | 0.796 |
B4V02_02665 | B4V02_02640 | GCA_001705305_02586 | GCA_001705305_02591 | Unannotated protein. | Unannotated protein; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.813 |
B4V02_02665 | B4V02_13270 | GCA_001705305_02586 | GCA_001705305_04821 | Unannotated protein. | Unannotated protein. | 0.773 |
B4V02_02665 | B4V02_15845 | GCA_001705305_02586 | GCA_001705305_01929 | Unannotated protein. | Unannotated protein. | 0.452 |
B4V02_02665 | B4V02_19165 | GCA_001705305_02586 | GCA_001705305_03589 | Unannotated protein. | Unannotated protein. | 0.474 |
B4V02_02665 | B4V02_19245 | GCA_001705305_02586 | GCA_001705305_03573 | Unannotated protein. | Unannotated protein. | 0.474 |
B4V02_13270 | B4V02_02640 | GCA_001705305_04821 | GCA_001705305_02591 | Unannotated protein. | Unannotated protein; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.746 |
B4V02_13270 | B4V02_02665 | GCA_001705305_04821 | GCA_001705305_02586 | Unannotated protein. | Unannotated protein. | 0.773 |
B4V02_13270 | B4V02_15845 | GCA_001705305_04821 | GCA_001705305_01929 | Unannotated protein. | Unannotated protein. | 0.530 |
B4V02_13270 | B4V02_19165 | GCA_001705305_04821 | GCA_001705305_03589 | Unannotated protein. | Unannotated protein. | 0.736 |
B4V02_13270 | B4V02_19245 | GCA_001705305_04821 | GCA_001705305_03573 | Unannotated protein. | Unannotated protein. | 0.736 |
B4V02_13270 | B4V02_19325 | GCA_001705305_04821 | GCA_001705305_03557 | Unannotated protein. | Unannotated protein. | 0.764 |
B4V02_13270 | glgB | GCA_001705305_04821 | GCA_001705305_00616 | Unannotated protein. | Unannotated protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.443 |
B4V02_15840 | B4V02_15845 | GCA_001705305_01927 | GCA_001705305_01929 | Unannotated protein. | Unannotated protein. | 0.539 |
B4V02_15840 | B4V02_19325 | GCA_001705305_01927 | GCA_001705305_03557 | Unannotated protein. | Unannotated protein. | 0.568 |
B4V02_15840 | GCA_001705305_01928 | GCA_001705305_01927 | GCA_001705305_01928 | Unannotated protein. | Unannotated protein. | 0.539 |
page 1 of 3