STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001705305_02408Unannotated protein. (141 aa)    
Predicted Functional Partners:
GCA_001705305_02405
Unannotated protein.
 
     0.969
GCA_001705305_02409
Unannotated protein.
 
     0.969
GCA_001705305_02410
Unannotated protein.
 
    0.968
GCA_001705305_02404
Unannotated protein.
 
     0.961
GCA_001705305_02406
Unannotated protein.
 
     0.953
GCA_001705305_02415
Unannotated protein.
 
     0.917
GCA_001705305_02401
Unannotated protein.
 
     0.910
GCA_001705305_02398
Unannotated protein.
 
     0.890
GCA_001705305_02399
Unannotated protein.
 
     0.877
GCA_001705305_02416
Unannotated protein.
 
     0.870
Your Current Organism:
Paenibacillus kribbensis
NCBI taxonomy Id: 172713
Other names: JCM 11465, KCTC 0766BP, P. kribbensis, Paenibacillus kribbensis Yoon et al. 2003, strain AM49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.