STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4V02_01470Unannotated protein. (326 aa)    
Predicted Functional Partners:
B4V02_01475
Unannotated protein; Belongs to the LysR transcriptional regulatory family.
 
    0.779
B4V02_04930
Unannotated protein.
  
     0.572
B4V02_06920
Unannotated protein.
  
     0.555
GCA_001705305_00186
Unannotated protein.
  
     0.551
B4V02_01040
Unannotated protein.
  
    0.547
B4V02_09255
Unannotated protein.
  
     0.520
B4V02_23060
Unannotated protein.
  
     0.506
B4V02_04070
Unannotated protein.
  
     0.492
GCA_001705305_00942
Unannotated protein.
 
     0.474
B4V02_22235
Unannotated protein.
  
     0.467
Your Current Organism:
Paenibacillus kribbensis
NCBI taxonomy Id: 172713
Other names: JCM 11465, KCTC 0766BP, P. kribbensis, Paenibacillus kribbensis Yoon et al. 2003, strain AM49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.