STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4V02_19720Unannotated protein. (295 aa)    
Predicted Functional Partners:
B4V02_19325
Unannotated protein.
       0.514
B4V02_19715
Unannotated protein.
       0.479
GCA_001705305_02593
Unannotated protein.
  
     0.458
B4V02_05720
Unannotated protein.
  
     0.449
B4V02_11350
Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.447
B4V02_01320
Unannotated protein.
  
     0.431
Your Current Organism:
Paenibacillus kribbensis
NCBI taxonomy Id: 172713
Other names: JCM 11465, KCTC 0766BP, P. kribbensis, Paenibacillus kribbensis Yoon et al. 2003, strain AM49
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.