STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4V02_11385Unannotated protein. (257 aa)    
Predicted Functional Partners:
GCA_001705305_04267
Unannotated protein.
       0.804
B4V02_11380
Unannotated protein.
       0.804
B4V02_11390
Unannotated protein.
       0.804
B4V02_11370
Unannotated protein.
       0.631
B4V02_11365
Unannotated protein.
       0.596
B4V02_19325
Unannotated protein.
       0.568
B4V02_11395
Unannotated protein.
       0.529
B4V02_11360
Unannotated protein; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family.
  
    0.498
B4V02_11400
Unannotated protein.
       0.465
B4V02_03915
Unannotated protein.
  
     0.433
Your Current Organism:
Paenibacillus kribbensis
NCBI taxonomy Id: 172713
Other names: JCM 11465, KCTC 0766BP, P. kribbensis, Paenibacillus kribbensis Yoon et al. 2003, strain AM49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.