STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001705305_04837Unannotated protein. (57 aa)    
Predicted Functional Partners:
B4V02_13350
Unannotated protein.
 
     0.944
B4V02_07145
Unannotated protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 
 0.607
B4V02_06945
Unannotated protein.
   
 
 0.607
B4V02_25495
Unannotated protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 
 0.607
B4V02_12200
Unannotated protein.
   
 
 0.497
B4V02_05260
Unannotated protein.
   
 
 0.497
B4V02_04545
Unannotated protein.
   
 
 0.497
B4V02_11500
Unannotated protein.
    
   0.489
GCA_001705305_04838
Unannotated protein.
       0.458
GCA_001705305_04839
Unannotated protein.
       0.458
Your Current Organism:
Paenibacillus kribbensis
NCBI taxonomy Id: 172713
Other names: JCM 11465, KCTC 0766BP, P. kribbensis, Paenibacillus kribbensis Yoon et al. 2003, strain AM49
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.