STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001705305_05593Unannotated protein. (278 aa)    
Predicted Functional Partners:
GCA_001705305_05592
Unannotated protein.
 
 0.834
GCA_001705305_05594
Unannotated protein.
  
    0.730
B4V02_07505
Unannotated protein.
 
 0.641
B4V02_05745
Unannotated protein.
 
 0.619
B4V02_16760
Unannotated protein.
 
 
 0.617
B4V02_13890
Unannotated protein.
 
 0.608
B4V02_21975
Unannotated protein.
 
 0.607
B4V02_04575
Unannotated protein.
 
 0.606
GCA_001705305_00964
Unannotated protein.
 
 
 0.604
B4V02_12775
Unannotated protein.
 
 0.599
Your Current Organism:
Paenibacillus kribbensis
NCBI taxonomy Id: 172713
Other names: JCM 11465, KCTC 0766BP, P. kribbensis, Paenibacillus kribbensis Yoon et al. 2003, strain AM49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.