STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMQ57620.1MFS transporter; Derived by automated computational analysis usinggene prediction method: Protein Homology; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (466 aa)    
Predicted Functional Partners:
AMQ57619.1
Transglutaminase; Derived by automated computational analysis usinggene prediction method: Protein Homology.
       0.623
AMQ57621.1
Hypothetical protein; Derived by automated computational analysis usinggene prediction method: Protein Homology.
     
 0.489
Your Current Organism:
Algoriphagus sanaruensis
NCBI taxonomy Id: 1727163
Other names: A. sanaruensis, Algoriphagus sanaruensis Maejima et al. 2019, Algoriphagus sp. M8-2, JCM 31446, LMG 29969, LMG:29969, strain M8-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.