STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001564115_01271Unannotated protein. (458 aa)    
Predicted Functional Partners:
GCA_001564115_02000
Unannotated protein.
 
 0.706
GCA_001564115_00445
Unannotated protein.
  
  
 0.600
GCA_001564115_01882
Unannotated protein.
  
  
 
0.594
GCA_001564115_01471
Unannotated protein.
    
 0.566
GCA_001564115_00446
Unannotated protein.
  
  
 0.560
GCA_001564115_01679
Unannotated protein.
   
 0.546
GCA_001564115_01272
Unannotated protein.
   
  0.543
GCA_001564115_00447
Unannotated protein.
 
 
0.534
GCA_001564115_02146
Unannotated protein.
  
  
 
0.529
GCA_001564115_01877
Unannotated protein.
  
 
 0.495
Your Current Organism:
Natrialbaceae archaeon TcBr11E2g8
NCBI taxonomy Id: 1729464
Other names: N. archaeon Tc-Br11_E2g8, Natrialbaceae archaeon Tc-Br11_E2g8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.