STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001564055_00325Unannotated protein. (396 aa)    
Predicted Functional Partners:
GCA_001564055_00326
Unannotated protein.
 
  0.973
GCA_001564055_00324
Unannotated protein.
 
  
  0.957
GCA_001564055_01726
Unannotated protein.
  
  0.869
GCA_001564055_02625
Unannotated protein.
  
  0.857
GCA_001564055_00554
Unannotated protein.
  
  0.846
GCA_001564055_00566
Unannotated protein.
  
  0.846
GCA_001564055_02106
Unannotated protein.
  
  0.845
GCA_001564055_00681
Unannotated protein.
   
  0.823
GCA_001564055_01173
Unannotated protein.
   
  0.823
GCA_001564055_02107
Unannotated protein.
  
  
  0.779
Your Current Organism:
Rhodothermaceae bacterium TcBr11B2g67
NCBI taxonomy Id: 1729468
Other names: R. bacterium Tc-Br11_B2g6_7, Rhodothermaceae bacterium Tc-Br11_B2g6_7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.