STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001564055_02341Unannotated protein. (261 aa)    
Predicted Functional Partners:
GCA_001564055_02490
Unannotated protein.
 
  
 0.973
GCA_001564055_02342
Unannotated protein.
  
  0.854
GCA_001564055_01642
Unannotated protein.
  
     0.657
GCA_001564055_02434
Unannotated protein.
  
     0.655
GCA_001564055_00841
Unannotated protein.
 
   
 0.576
GCA_001564055_00995
Unannotated protein.
  
     0.574
GCA_001564055_01332
Unannotated protein.
  
     0.493
GCA_001564055_00918
Unannotated protein.
  
     0.459
GCA_001564055_02343
Unannotated protein.
       0.436
GCA_001564055_02346
Unannotated protein.
  
     0.427
Your Current Organism:
Rhodothermaceae bacterium TcBr11B2g67
NCBI taxonomy Id: 1729468
Other names: R. bacterium Tc-Br11_B2g6_7, Rhodothermaceae bacterium Tc-Br11_B2g6_7
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.