STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AO394_07885Band 7 protein. (309 aa)    
Predicted Functional Partners:
AO395_00790
annotation not available
 
     0.946
ftsH
ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.853
AO394_06675
Uncharacterized protein; Belongs to the UPF0235 family.
  
    0.466
AO394_02170
Uncharacterized protein; Belongs to the peptidase M16 family.
   
 0.448
AO396_03840
Uncharacterized protein; Belongs to the peptidase M16 family.
   
 0.448
AO396_07205
Uncharacterized protein.
   
 0.448
AO395_09640
annotation not available
   
 0.448
AO394_07880
MazE family transcriptional regulator.
       0.436
AO394_07875
mRNA interferase; Toxic component of a type II toxin-antitoxin (TA) system.
       0.436
AO394_02100
AAA domain-containing protein.
  
 
 0.431
Your Current Organism:
Fermentibacter daniensis
NCBI taxonomy Id: 1729713
Other names: C. Fermentibacter daniensis, Candidatus Fermentibacter daniensis, candidate division Hyd24-12 bacterium Dam_1, candidate division Hyd24-12 bacterium Ran_1, candidate division Hyd24-12 bacterium Vib_1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.