STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AO394_00100HlyD_D23 domain-containing protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (346 aa)    
Predicted Functional Partners:
AO394_00095
Uncharacterized protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.973
AO396_00365
Uncharacterized protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.972
AO396_05440
Uncharacterized protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.872
AO396_07475
Uncharacterized protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.870
AO394_04665
Uncharacterized protein.
 
 0.847
AO394_00450
Uncharacterized protein.
 
 0.829
AO394_04645
Uncharacterized protein.
  
 0.807
AO394_04650
Uncharacterized protein.
  
 0.805
AO394_09295
HlyD_D23 domain-containing protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.774
AO394_02805
Uncharacterized protein.
  
 0.767
Your Current Organism:
Fermentibacter daniensis
NCBI taxonomy Id: 1729713
Other names: C. Fermentibacter daniensis, Candidatus Fermentibacter daniensis, candidate division Hyd24-12 bacterium Dam_1, candidate division Hyd24-12 bacterium Ran_1, candidate division Hyd24-12 bacterium Vib_1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.