STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AO396_07475Uncharacterized protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1022 aa)    
Predicted Functional Partners:
AO394_09295
HlyD_D23 domain-containing protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.971
AO395_04865
annotation not available
 
 0.963
AO394_00445
HlyD_D23 domain-containing protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.905
AO394_00100
HlyD_D23 domain-containing protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.870
AO394_00450
Uncharacterized protein.
 0.808
AO396_07465
HTH tetR-type domain-containing protein.
     
 0.760
AO394_04665
Uncharacterized protein.
  
 0.747
AO395_09155
annotation not available
  
 
 0.686
AO394_04660
HlyD_D23 domain-containing protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
 0.670
AO396_01380
Uncharacterized protein.
    
 
 0.564
Your Current Organism:
Fermentibacter daniensis
NCBI taxonomy Id: 1729713
Other names: C. Fermentibacter daniensis, Candidatus Fermentibacter daniensis, candidate division Hyd24-12 bacterium Dam_1, candidate division Hyd24-12 bacterium Ran_1, candidate division Hyd24-12 bacterium Vib_1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.