STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AO394_03030Glyco_trans_2-like domain-containing protein. (266 aa)    
Predicted Functional Partners:
AO394_03025
Bac_transf domain-containing protein.
 
 
 0.967
AO396_04715
Bac_transf domain-containing protein.
 
 
 0.887
AO394_00240
Bac_transf domain-containing protein.
 
 
 0.826
AO394_05405
Bac_transf domain-containing protein.
 
 
 0.811
AO394_09305
Glyco_trans_2-like domain-containing protein.
 
   
  0.730
AO395_08735
annotation not available
 
 
 0.726
AO394_05200
Uncharacterized protein.
 
  
 0.719
AO394_06225
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 
 0.684
AO394_05240
Uncharacterized protein.
  
 
 0.576
AO394_03035
Uncharacterized protein; Belongs to the bacterial histone-like protein family.
  
  
 0.550
Your Current Organism:
Fermentibacter daniensis
NCBI taxonomy Id: 1729713
Other names: C. Fermentibacter daniensis, Candidatus Fermentibacter daniensis, candidate division Hyd24-12 bacterium Dam_1, candidate division Hyd24-12 bacterium Ran_1, candidate division Hyd24-12 bacterium Vib_1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.