STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AO394_08345NTP_transferase domain-containing protein. (325 aa)    
Predicted Functional Partners:
AO394_03655
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.881
AO395_07775
annotation not available
  
 
  0.847
AO394_01025
UDP-glucose 6-dehydrogenase.
  
 
 0.836
AO396_10020
Uncharacterized protein.
       0.779
AO394_06345
Uncharacterized protein.
  
 
 0.769
AO394_03025
Bac_transf domain-containing protein.
  
 
 0.673
AO394_05405
Bac_transf domain-containing protein.
  
 
 0.673
AO394_00240
Bac_transf domain-containing protein.
  
 
 0.673
AO396_04715
Bac_transf domain-containing protein.
  
 
 0.673
AO395_02580
annotation not available
  
 
 0.638
Your Current Organism:
Fermentibacter daniensis
NCBI taxonomy Id: 1729713
Other names: C. Fermentibacter daniensis, Candidatus Fermentibacter daniensis, candidate division Hyd24-12 bacterium Dam_1, candidate division Hyd24-12 bacterium Ran_1, candidate division Hyd24-12 bacterium Vib_1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.