STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AO394_08790NusG_II domain-containing protein. (131 aa)    
Predicted Functional Partners:
AO396_10045
Uncharacterized protein.
 
    0.889
AO394_08795
Radical_SAM domain-containing protein.
  
    0.789
AO394_08800
FAD:protein FMN transferase; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
       0.788
AO396_04820
Uncharacterized protein.
       0.773
AO394_08815
Uncharacterized protein.
       0.727
AO394_08810
Uncharacterized protein.
       0.727
AO394_04370
Uncharacterized protein.
 
 
  0.575
AO396_05920
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
 
  0.511
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.438
AO396_04800
Uncharacterized protein.
       0.438
Your Current Organism:
Fermentibacter daniensis
NCBI taxonomy Id: 1729713
Other names: C. Fermentibacter daniensis, Candidatus Fermentibacter daniensis, candidate division Hyd24-12 bacterium Dam_1, candidate division Hyd24-12 bacterium Ran_1, candidate division Hyd24-12 bacterium Vib_1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.