Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000000029annotation not available (86 aa)    
Predicted Functional Partners:
ripk1
Receptor interacting serine/threonine kinase 1.
    
  0.883
ENSENLP00000007966
annotation not available
    
  0.821
ENSENLP00000009216
annotation not available
    
  0.821
LOC115053350
Caspase-1-like.
    
  0.821
LOC115057453
Caspase-8-like.
    
  0.757
LOC115057682
Caspase-8-like.
    
  0.757
ENSENLP00000052058
Caspase 10, apoptosis-related cysteine peptidase.
    
  0.757
LOC115056762
Receptor-interacting serine/threonine-protein kinase 3-like.
    
  0.731
LOC115058882
Receptor-interacting serine/threonine-protein kinase 3-like.
    
  0.731
ENSENLP00000007356
annotation not available
     
  0.720
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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