ENSENLP00000000059 protein (Echeneis naucrates)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSENLP00000000059

Mitochondrial translational initiation factor 2. (633 aa)

Predicted Functional Partners:

fau

0.999

rps15

0.998

rps3

0.998

rps11

0.997

mrps5

0.996

rps5

0.994

mrps7

0.994

rps2

0.994

mrpl15

0.993

eif1ax

0.992

Your Current Organism:

Echeneis naucrates

NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSENLP00000000059	eif1ax	ENSENLP00000000059	ENSENLP00000021430	Mitochondrial translational initiation factor 2.	Eukaryotic translation initiation factor 1A X-linked.	0.992
ENSENLP00000000059	fau	ENSENLP00000000059	ENSENLP00000047130	Mitochondrial translational initiation factor 2.	FAU ubiquitin like and ribosomal protein S30 fusion.	0.999
ENSENLP00000000059	mrpl15	ENSENLP00000000059	ENSENLP00000043993	Mitochondrial translational initiation factor 2.	Mitochondrial ribosomal protein L15.	0.993
ENSENLP00000000059	mrps5	ENSENLP00000000059	ENSENLP00000004962	Mitochondrial translational initiation factor 2.	Mitochondrial ribosomal protein S5.	0.996
ENSENLP00000000059	mrps7	ENSENLP00000000059	ENSENLP00000036424	Mitochondrial translational initiation factor 2.	Mitochondrial ribosomal protein S7.	0.994
ENSENLP00000000059	rps11	ENSENLP00000000059	ENSENLP00000030833	Mitochondrial translational initiation factor 2.	Ribosomal protein S11.	0.997
ENSENLP00000000059	rps15	ENSENLP00000000059	ENSENLP00000019814	Mitochondrial translational initiation factor 2.	Ribosomal protein S15.	0.998
ENSENLP00000000059	rps2	ENSENLP00000000059	ENSENLP00000042062	Mitochondrial translational initiation factor 2.	Ribosomal protein S2.	0.994
ENSENLP00000000059	rps3	ENSENLP00000000059	ENSENLP00000034745	Mitochondrial translational initiation factor 2.	Ribosomal protein S3.	0.998
ENSENLP00000000059	rps5	ENSENLP00000000059	ENSENLP00000032457	Mitochondrial translational initiation factor 2.	Ribosomal protein S5.	0.994
eif1ax	ENSENLP00000000059	ENSENLP00000021430	ENSENLP00000000059	Eukaryotic translation initiation factor 1A X-linked.	Mitochondrial translational initiation factor 2.	0.992
eif1ax	fau	ENSENLP00000021430	ENSENLP00000047130	Eukaryotic translation initiation factor 1A X-linked.	FAU ubiquitin like and ribosomal protein S30 fusion.	0.997
eif1ax	mrpl15	ENSENLP00000021430	ENSENLP00000043993	Eukaryotic translation initiation factor 1A X-linked.	Mitochondrial ribosomal protein L15.	0.982
eif1ax	mrps5	ENSENLP00000021430	ENSENLP00000004962	Eukaryotic translation initiation factor 1A X-linked.	Mitochondrial ribosomal protein S5.	0.998
eif1ax	mrps7	ENSENLP00000021430	ENSENLP00000036424	Eukaryotic translation initiation factor 1A X-linked.	Mitochondrial ribosomal protein S7.	0.998
eif1ax	rps11	ENSENLP00000021430	ENSENLP00000030833	Eukaryotic translation initiation factor 1A X-linked.	Ribosomal protein S11.	0.999
eif1ax	rps15	ENSENLP00000021430	ENSENLP00000019814	Eukaryotic translation initiation factor 1A X-linked.	Ribosomal protein S15.	0.999
eif1ax	rps2	ENSENLP00000021430	ENSENLP00000042062	Eukaryotic translation initiation factor 1A X-linked.	Ribosomal protein S2.	0.999
eif1ax	rps3	ENSENLP00000021430	ENSENLP00000034745	Eukaryotic translation initiation factor 1A X-linked.	Ribosomal protein S3.	0.999
eif1ax	rps5	ENSENLP00000021430	ENSENLP00000032457	Eukaryotic translation initiation factor 1A X-linked.	Ribosomal protein S5.	0.998