STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gse1Gse1 coiled-coil protein. (2125 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.866
ENSENLP00000026836
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.863
LOC115061434
E3 SUMO-protein ligase RanBP2-like.
    
 0.744
rbbp5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.662
ash2l
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.660
ENSENLP00000046858
annotation not available
    
  0.651
ENSENLP00000046868
annotation not available
    
  0.651
ENSENLP00000054052
annotation not available
    
 0.646
kdm6a
Lysine demethylase 6A.
    
 0.635
ENSENLP00000030550
Lysine (K)-specific demethylase 6B, a.
    
 0.635
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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