STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hemk1HemK methyltransferase family member 1. (350 aa)    
Predicted Functional Partners:
trmt112
tRNA methyltransferase subunit 11-2.
    
 0.991
mtrf1l
Mitochondrial translational release factor 1 like.
  
 
 0.913
LOC115043453
Nicotinamide phosphoribosyltransferase-like.
  
 
 0.913
nampt
Nicotinamide phosphoribosyltransferase.
  
 
 0.913
c9h12orf65
Chromosome 9 C12orf65 homolog.
  
 
 0.913
ENSENLP00000050975
Mitochondrial translational release factor 1.
  
 
 0.913
ENSENLP00000050984
annotation not available
  
 
 0.913
cpox
Coproporphyrinogen oxidase.
  
 
 0.879
ENSENLP00000021135
Eukaryotic translation termination factor 1a.
   
 0.867
fech
Ferrochelatase.
    
 0.867
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.