Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000001013Neurocan b. (637 aa)    
Predicted Functional Partners:
ENSENLP00000002460
annotation not available
   
 0.899
ENSENLP00000005038
annotation not available
   
 0.899
ENSENLP00000008993
Protein tyrosine phosphatase receptor type Z1a.
   
 0.883
ENSENLP00000020159
Protein tyrosine phosphatase receptor type Z1b.
   
 0.883
ENSENLP00000005684
Oligodendrocyte myelin glycoprotein b.
   
 
 0.819
ENSENLP00000032263
annotation not available
   
 
 0.819
ENSENLP00000000999
Contactin 2.
   
 0.748
LYPD6
LY6/PLAUR domain containing 6.
    
 0.734
tnn
Tenascin N.
    
 0.693
ppic
Peptidylprolyl isomerase C.
    
 
 0.680
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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