STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hapln4Hyaluronan and proteoglycan link protein 4. (394 aa)    
Predicted Functional Partners:
mysm1
Myb like, SWIRM and MPN domains 1.
    
  0.560
ENSENLP00000048193
annotation not available
    
 0.551
ENSENLP00000027901
WD repeat domain 90.
    
 0.540
ENSENLP00000022935
Fras1 related extracellular matrix 1a.
    
 0.521
ENSENLP00000030965
Fras1 related extracellular matrix 1b.
    
 0.521
arid4a
AT-rich interaction domain 4A.
    
 0.516
arid4b
AT-rich interaction domain 4B.
    
 0.516
ENSENLP00000044503
Fraser extracellular matrix complex subunit 1.
   
 0.503
slf1
SMC5-SMC6 complex localization factor 1.
   
 0.502
LOC115043973
Macrophage-stimulating protein receptor-like.
    
  0.488
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.